NeXus Metadata#

ICAT metadata can be stored in NeXus-compliant HDF5 files.

Dataset Metadata#

An ESRF dataset is a sequence of BLISS scans.

The following ICAT metadata fields are associated to a dataset (see HDF5):

@NX_class: NXroot
dataset1
- sample
  - notes
    - @NX_class: NXnote
    - notes: string29
  - positioners
    - name: ['item30']
    - value: ['item31']
    - @NX_class: NXpositioner
  - protein
    - @NX_class: NXcollection
    - acronym: string32
    - name: string33
  - changer
    - @NX_class: NXcollection
    - position: string34
    - name: string35
  - patient
    - age@units: a
    - weight@units: kg
    - size@units: cm
    - age: 38.1
    - weight: 40.1
    - size: 41.1
    - @NX_class: NXcollection
    - institute: string36
    - number: 37
    - sex: string39
    - info: string42
    - organ_name: string43
    - organ_description: string44
  - environment
    - sensors
      - name: ['item48']
      - value: ['item49']
      - @NX_class: NXsensor
    - @NX_class: NXenvironment
    - name: string45
    - type: string46
    - description: string47
  - tracking
    - shipment
      - @NX_class: NXsubentry
      - id: string50
      - name: string51
    - parcel
      - storage_condition@units: °C
      - storage_condition: 54.1
      - @NX_class: NXsubentry
      - id: string52
      - name: string53
    - container
      - @NX_class: NXcollection
      - type: string55
      - capacity: string56
      - position: string57
      - id: string58
      - name: string59
    - @NX_class: NXsubentry
  - localisation
    - @NX_class: NXcollection
    - name: string60
    - country: string61
    - continental_region: string62
  - paleo
    - geological_time
      - @NX_class: NXcollection
      - formation: string63
      - era: string64
      - period: string65
      - epoch: string66
    - classification
      - @NX_class: NXcollection
      - species: string67
      - material_type: string68
      - clade1: string69
      - clade2: string70
      - clade3: string71
      - clade4: string72
      - clade5: string73
      - clade6: string74
    - @NX_class: NXcollection
  - categories: ['item86']
  - @NX_class: NXsample
  - name: string25
  - description: string26
  - distance: string27
  - support: string28
  - situation: string75
  - ub_matrix: string76
  - temperature_env: string77
  - chemical_formula: string78
  - subject: string79
  - repository_institution: string80
  - collection_number: string81
  - collection_year: 82
  - collection_period: string83
  - creator: string84
  - creator_role: string85
- fresnel_zone_plate
  - outer_diameter@units: µm
  - outermost_zone_width@units: nm
  - central_stop_diameter@units: µm
  - zone_height@units: µm
  - central_stop_thickness@units: µm
  - distance@units: mm
  - outer_diameter: 87.1
  - outermost_zone_width: 88.1
  - central_stop_diameter: 89.1
  - zone_height: 91.1
  - central_stop_thickness: 95.1
  - distance: 97.1
  - @NX_class: NXfresnel_zone_plate
  - fabrication: string90
  - zone_material: string92
  - zone_support_material: string93
  - central_stop_material: string94
  - support_membrane_material: string96
  - component_index: 98.1
- aperture
  - geometry
    - @NX_class: NXgeometry
    - vertical: string101
    - horizontal: string102
    - transformation: string103
    - distance: string104
    - component_index: string105
  - @NX_class: NXaperture
  - description: string99
  - material: string100
- mirror
  - geometry
    - distance@units: m
    - distance: 114.1
    - @NX_class: NXgeometry
    - vertical: string111
    - horizontal: string112
    - transformation: string113
    - component_index: 115
  - @NX_class: NXmirror
  - type: single
  - description: string107
  - interior_atmosphere: vacuum
  - substrate_material: string109
  - coating_material: string110
- instrument
  - variables
    - name: ['item117']
    - value: ['item118']
    - @NX_class: NXcollection
  - positioners
    - name: ['item119']
    - value: ['item120']
    - @NX_class: NXpositioner
  - beam
    - distance@units: m
    - incident_energy@units: keV
    - final_energy@units: keV
    - energy_transfer@units: keV
    - incident_wavelength@units: Å
    - incident_wavelength_spread@units: Å
    - final_wavelength@units: Å
    - final_wavelength_spread@units: Å
    - incident_beam_divergence@units: deg
    - horizontal_incident_beam_divergence@units: deg
    - vertical_incident_beam_divergence@units: deg
    - final_beam_divergence@units: deg
    - extent@units: m
    - flux@units: photons/s
    - distance: 121.1
    - incident_energy: [122.1]
    - final_energy: 123.1
    - energy_transfer: 124.1
    - incident_wavelength: [125.1]
    - incident_wavelength_weights: [126.1]
    - incident_wavelength_spread: [127.1]
    - final_wavelength: 128.1
    - final_wavelength_spread: 129.1
    - incident_beam_divergence: 130.1
    - horizontal_incident_beam_divergence: 131.1
    - vertical_incident_beam_divergence: 132.1
    - final_beam_divergence: 133.1
    - extent: 134.1
    - flux: 135.1
    - @NX_class: NXbeam
    - incident_polarization: 136.1
    - final_polarization: 137.1
    - incident_polarization_stokes: 138.1
    - final_polarization_stokes: 139.1
  - monochromator
    - crystal
      - @NX_class: NXcrystal
      - usage: string143
      - d_spacing: string144
      - type: string145
      - reflection: string146
    - @NX_class: NXmonochromator
    - name: string140
    - energy: string141
    - wavelength: string142
  - source
    - @NX_class: NXsource
    - mode: string147
    - current: string148
    - distance: string149
    - name: string150
    - type: string151
    - probe: string152
    - emittance_x: string153
    - emittance_y: string154
  - laser01
    - energy@units: J
    - wavelength@units: m
    - repetition_rate@units: Hz
    - pulse_width@units: s
    - delay@units: s
    - energy: 158.1
    - wavelength: 159.1
    - repetition_rate: 160.1
    - pulse_width: 161.1
    - delay: 162.1
    - @NX_class: NXsource
    - name: string155
    - type: string156
    - probe: string157
  - laser02
    - energy@units: J
    - wavelength@units: m
    - repetition_rate@units: Hz
    - pulse_width@units: s
    - delay@units: s
    - energy: 166.1
    - wavelength: 167.1
    - repetition_rate: 168.1
    - pulse_width: 169.1
    - delay: 170.1
    - @NX_class: NXsource
    - name: string163
    - type: string164
    - probe: string165
  - primary_slit
    - vertical_gap: [172.1]
    - vertical_offset: [173.1]
    - horizontal_gap: [174.1]
    - horizontal_offset: [175.1]
    - blade_up: [176.1]
    - blade_down: [177.1]
    - blade_front: [178.1]
    - blade_back: [179.1]
    - @NX_class: NXslit
    - name: string171
  - secondary_slit
    - vertical_gap: [181.1]
    - vertical_offset: [182.1]
    - horizontal_gap: [183.1]
    - horizontal_offset: [184.1]
    - blade_up: [185.1]
    - blade_down: [186.1]
    - blade_front: [187.1]
    - blade_back: [188.1]
    - @NX_class: NXslit
    - name: string180
  - slits
    - name: ['item189']
    - vertical_gap: [190.1]
    - vertical_offset: [191.1]
    - horizontal_gap: [192.1]
    - horizontal_offset: [193.1]
    - blade_up: [194.1]
    - blade_down: [195.1]
    - blade_front: [196.1]
    - blade_back: [197.1]
    - @NX_class: NXslit
  - xraylens01
    - @NX_class: NXxraylens
    - lens_geometry: string198
    - focus_type: string199
    - lens_thickness: string200
    - lens_length: string201
    - curvature: string202
    - aperture: string203
    - number_of_lenses: 204
    - lens_material: string205
  - xraylens02
    - @NX_class: NXxraylens
    - lens_geometry: string206
    - focus_type: string207
    - lens_thickness: string208
    - lens_length: string209
    - curvature: string210
    - aperture: string211
    - number_of_lenses: 212
    - lens_material: string213
  - xraylens03
    - @NX_class: NXxraylens
    - lens_geometry: string214
    - focus_type: string215
    - lens_thickness: string216
    - lens_length: string217
    - curvature: string218
    - aperture: string219
    - number_of_lenses: 220
    - lens_material: string221
  - xraylens04
    - @NX_class: NXxraylens
    - lens_geometry: string222
    - focus_type: string223
    - lens_thickness: string224
    - lens_length: string225
    - curvature: string226
    - aperture: string227
    - number_of_lenses: 228
    - lens_material: string229
  - xraylens05
    - @NX_class: NXxraylens
    - lens_geometry: string230
    - focus_type: string231
    - lens_thickness: string232
    - lens_length: string233
    - curvature: string234
    - aperture: string235
    - number_of_lenses: 236
    - lens_material: string237
  - xraylens06
    - @NX_class: NXxraylens
    - lens_geometry: string238
    - focus_type: string239
    - lens_thickness: string240
    - lens_length: string241
    - curvature: string242
    - aperture: string243
    - number_of_lenses: 244
    - lens_material: string245
  - xraylens07
    - @NX_class: NXxraylens
    - lens_geometry: string246
    - focus_type: string247
    - lens_thickness: string248
    - lens_length: string249
    - curvature: string250
    - aperture: string251
    - number_of_lenses: 252
    - lens_material: string253
  - xraylens08
    - @NX_class: NXxraylens
    - lens_geometry: string254
    - focus_type: string255
    - lens_thickness: string256
    - lens_length: string257
    - curvature: string258
    - aperture: string259
    - number_of_lenses: 260
    - lens_material: string261
  - xraylens09
    - @NX_class: NXxraylens
    - lens_geometry: string262
    - focus_type: string263
    - lens_thickness: string264
    - lens_length: string265
    - curvature: string266
    - aperture: string267
    - number_of_lenses: 268
    - lens_material: string269
  - xraylens10
    - @NX_class: NXxraylens
    - lens_geometry: string270
    - focus_type: string271
    - lens_thickness: string272
    - lens_length: string273
    - curvature: string274
    - aperture: string275
    - number_of_lenses: 276
    - lens_material: string277
  - attenuator01
    - positioners
      - name: ['item282']
      - value: ['item283']
      - @NX_class: NXpositioner
    - @NX_class: NXattenuator
    - type: string278
    - thickness: string279
    - status: string280
    - distance: string281
    - description: string284
  - attenuator02
    - positioners
      - name: ['item289']
      - value: ['item290']
      - @NX_class: NXpositioner
    - @NX_class: NXattenuator
    - type: string285
    - thickness: string286
    - status: string287
    - distance: string288
  - attenuator03
    - positioners
      - name: ['item295']
      - value: ['item296']
      - @NX_class: NXpositioner
    - @NX_class: NXattenuator
    - type: string291
    - thickness: string292
    - status: string293
    - distance: string294
  - attenuator04
    - positioners
      - name: ['item301']
      - value: ['item302']
      - @NX_class: NXpositioner
    - @NX_class: NXattenuator
    - type: string297
    - thickness: string298
    - status: string299
    - distance: string300
  - attenuator05
    - positioners
      - name: ['item307']
      - value: ['item308']
      - @NX_class: NXpositioner
    - @NX_class: NXattenuator
    - type: string303
    - thickness: string304
    - status: string305
    - distance: string306
  - attenuator06
    - positioners
      - name: ['item313']
      - value: ['item314']
      - @NX_class: NXpositioner
    - @NX_class: NXattenuator
    - type: string309
    - thickness: string310
    - status: string311
    - distance: string312
  - attenuator07
    - positioners
      - name: ['item319']
      - value: ['item320']
      - @NX_class: NXpositioner
    - @NX_class: NXattenuator
    - type: string315
    - thickness: string316
    - status: string317
    - distance: string318
  - attenuator08
    - positioners
      - name: ['item325']
      - value: ['item326']
      - @NX_class: NXpositioner
    - @NX_class: NXattenuator
    - type: string321
    - thickness: string322
    - status: string323
    - distance: string324
  - attenuator09
    - positioners
      - name: ['item331']
      - value: ['item332']
      - @NX_class: NXpositioner
    - @NX_class: NXattenuator
    - type: string327
    - thickness: string328
    - status: string329
    - distance: string330
  - attenuator10
    - positioners
      - name: ['item337']
      - value: ['item338']
      - @NX_class: NXpositioner
    - @NX_class: NXattenuator
    - type: string333
    - thickness: string334
    - status: string335
    - distance: string336
  - attenuator11
    - positioners
      - name: ['item343']
      - value: ['item344']
      - @NX_class: NXpositioner
    - @NX_class: NXattenuator
    - type: string339
    - thickness: string340
    - status: string341
    - distance: string342
  - attenuator12
    - positioners
      - name: ['item349']
      - value: ['item350']
      - @NX_class: NXpositioner
    - @NX_class: NXattenuator
    - type: string345
    - thickness: string346
    - status: string347
    - distance: string348
  - attenuator13
    - positioners
      - name: ['item355']
      - value: ['item356']
      - @NX_class: NXpositioner
    - @NX_class: NXattenuator
    - type: string351
    - thickness: string352
    - status: string353
    - distance: string354
  - attenuator14
    - positioners
      - name: ['item361']
      - value: ['item362']
      - @NX_class: NXpositioner
    - @NX_class: NXattenuator
    - type: string357
    - thickness: string358
    - status: string359
    - distance: string360
  - attenuator15
    - positioners
      - name: ['item367']
      - value: ['item368']
      - @NX_class: NXpositioner
    - @NX_class: NXattenuator
    - type: string363
    - thickness: string364
    - status: string365
    - distance: string366
  - insertion_device
    - gap
      - name: ['item369']
      - value: ['item370']
      - @NX_class: NXpositioner
    - taper
      - name: ['item371']
      - value: ['item372']
      - @NX_class: NXpositioner
    - @NX_class: NXinsertion_device
  - optics
    - positioners
      - name: ['item373']
      - value: ['item374']
      - @NX_class: NXpositioner
    - @NX_class: NXcollection
  - environment
    - sensors
      - name: ['item375']
      - value: ['item376']
      - @NX_class: NXsensor
    - @NX_class: NXenvironment
  - cryostat01
    - value@units: K
    - value: 377.1
    - @NX_class: NXenvironment
  - detector01
    - positioners
      - name: ['item405']
      - value: ['item406']
      - @NX_class: NXpositioner
    - rois
      - value: [(408, 409)]
      - @NX_class: NXcollection
      - name: string407
    - @NX_class: NXdetector
    - name: string378
    - type: string379
    - manufacturer: string380
    - model: string381
    - preset_time: 382.1
    - live_time: 383.1
    - elapsed_time: 384.1
    - calibration: string385
    - description: string386
    - local_name: string387
    - x_pixel_size: string388
    - y_pixel_size: string389
    - calibration_date: string390
    - layout: string391
    - beam_center_x: string392
    - beam_center_y: string393
    - flatfield_applied: string394
    - pixel_mask: string395
    - pixel_mask_applied: string396
    - countrate_correction_applied: string397
    - saturation_value: string398
    - threshold_energy: string399
    - sensor_thickness: string400
    - sensor_material: string401
    - bit_depth_readout: string402
    - distance: string403
    - frame_time: string404
    - acquisition_mode: string409
  - detector02
    - positioners
      - name: ['item437']
      - value: ['item438']
      - @NX_class: NXpositioner
    - rois
      - value: [(440, 441)]
      - @NX_class: NXcollection
      - name: string439
    - @NX_class: NXdetector
    - name: string410
    - type: string411
    - manufacturer: string412
    - model: string413
    - preset_time: 414.1
    - live_time: 415.1
    - elapsed_time: 416.1
    - calibration: string417
    - description: string418
    - local_name: string419
    - x_pixel_size: string420
    - y_pixel_size: string421
    - calibration_date: string422
    - layout: string423
    - beam_center_x: string424
    - beam_center_y: string425
    - flatfield_applied: string426
    - pixel_mask: string427
    - pixel_mask_applied: string428
    - countrate_correction_applied: string429
    - saturation_value: string430
    - threshold_energy: string431
    - sensor_thickness: string432
    - sensor_material: string433
    - bit_depth_readout: string434
    - distance: string435
    - frame_time: string436
    - acquisition_mode: string441
  - detector03
    - positioners
      - name: ['item469']
      - value: ['item470']
      - @NX_class: NXpositioner
    - rois
      - value: [(472, 473)]
      - @NX_class: NXcollection
      - name: string471
    - @NX_class: NXdetector
    - name: string442
    - type: string443
    - manufacturer: string444
    - model: string445
    - preset_time: 446.1
    - live_time: 447.1
    - elapsed_time: 448.1
    - calibration: string449
    - description: string450
    - local_name: string451
    - x_pixel_size: string452
    - y_pixel_size: string453
    - calibration_date: string454
    - layout: string455
    - beam_center_x: string456
    - beam_center_y: string457
    - flatfield_applied: string458
    - pixel_mask: string459
    - pixel_mask_applied: string460
    - countrate_correction_applied: string461
    - saturation_value: string462
    - threshold_energy: string463
    - sensor_thickness: string464
    - sensor_material: string465
    - bit_depth_readout: string466
    - distance: string467
    - frame_time: string468
    - acquisition_mode: string473
  - detector04
    - positioners
      - name: ['item501']
      - value: ['item502']
      - @NX_class: NXpositioner
    - rois
      - value: [(504, 505)]
      - @NX_class: NXcollection
      - name: string503
    - @NX_class: NXdetector
    - name: string474
    - type: string475
    - manufacturer: string476
    - model: string477
    - preset_time: 478.1
    - live_time: 479.1
    - elapsed_time: 480.1
    - calibration: string481
    - description: string482
    - local_name: string483
    - x_pixel_size: string484
    - y_pixel_size: string485
    - calibration_date: string486
    - layout: string487
    - beam_center_x: string488
    - beam_center_y: string489
    - flatfield_applied: string490
    - pixel_mask: string491
    - pixel_mask_applied: string492
    - countrate_correction_applied: string493
    - saturation_value: string494
    - threshold_energy: string495
    - sensor_thickness: string496
    - sensor_material: string497
    - bit_depth_readout: string498
    - distance: string499
    - frame_time: string500
    - acquisition_mode: string505
  - detector05
    - positioners
      - name: ['item533']
      - value: ['item534']
      - @NX_class: NXpositioner
    - rois
      - value: [(536, 537)]
      - @NX_class: NXcollection
      - name: string535
    - @NX_class: NXdetector
    - name: string506
    - type: string507
    - manufacturer: string508
    - model: string509
    - preset_time: 510.1
    - live_time: 511.1
    - elapsed_time: 512.1
    - calibration: string513
    - description: string514
    - local_name: string515
    - x_pixel_size: string516
    - y_pixel_size: string517
    - calibration_date: string518
    - layout: string519
    - beam_center_x: string520
    - beam_center_y: string521
    - flatfield_applied: string522
    - pixel_mask: string523
    - pixel_mask_applied: string524
    - countrate_correction_applied: string525
    - saturation_value: string526
    - threshold_energy: string527
    - sensor_thickness: string528
    - sensor_material: string529
    - bit_depth_readout: string530
    - distance: string531
    - frame_time: string532
    - acquisition_mode: string537
  - detector06
    - positioners
      - name: ['item565']
      - value: ['item566']
      - @NX_class: NXpositioner
    - rois
      - value: [(568, 569)]
      - @NX_class: NXcollection
      - name: string567
    - @NX_class: NXdetector
    - name: string538
    - type: string539
    - manufacturer: string540
    - model: string541
    - preset_time: 542.1
    - live_time: 543.1
    - elapsed_time: 544.1
    - calibration: string545
    - description: string546
    - local_name: string547
    - x_pixel_size: string548
    - y_pixel_size: string549
    - calibration_date: string550
    - layout: string551
    - beam_center_x: string552
    - beam_center_y: string553
    - flatfield_applied: string554
    - pixel_mask: string555
    - pixel_mask_applied: string556
    - countrate_correction_applied: string557
    - saturation_value: string558
    - threshold_energy: string559
    - sensor_thickness: string560
    - sensor_material: string561
    - bit_depth_readout: string562
    - distance: string563
    - frame_time: string564
    - acquisition_mode: string569
  - detector07
    - positioners
      - name: ['item597']
      - value: ['item598']
      - @NX_class: NXpositioner
    - rois
      - value: [(600, 601)]
      - @NX_class: NXcollection
      - name: string599
    - @NX_class: NXdetector
    - name: string570
    - type: string571
    - manufacturer: string572
    - model: string573
    - preset_time: 574.1
    - live_time: 575.1
    - elapsed_time: 576.1
    - calibration: string577
    - description: string578
    - local_name: string579
    - x_pixel_size: string580
    - y_pixel_size: string581
    - calibration_date: string582
    - layout: string583
    - beam_center_x: string584
    - beam_center_y: string585
    - flatfield_applied: string586
    - pixel_mask: string587
    - pixel_mask_applied: string588
    - countrate_correction_applied: string589
    - saturation_value: string590
    - threshold_energy: string591
    - sensor_thickness: string592
    - sensor_material: string593
    - bit_depth_readout: string594
    - distance: string595
    - frame_time: string596
    - acquisition_mode: string601
  - detector08
    - positioners
      - name: ['item629']
      - value: ['item630']
      - @NX_class: NXpositioner
    - rois
      - value: [(632, 633)]
      - @NX_class: NXcollection
      - name: string631
    - @NX_class: NXdetector
    - name: string602
    - type: string603
    - manufacturer: string604
    - model: string605
    - preset_time: 606.1
    - live_time: 607.1
    - elapsed_time: 608.1
    - calibration: string609
    - description: string610
    - local_name: string611
    - x_pixel_size: string612
    - y_pixel_size: string613
    - calibration_date: string614
    - layout: string615
    - beam_center_x: string616
    - beam_center_y: string617
    - flatfield_applied: string618
    - pixel_mask: string619
    - pixel_mask_applied: string620
    - countrate_correction_applied: string621
    - saturation_value: string622
    - threshold_energy: string623
    - sensor_thickness: string624
    - sensor_material: string625
    - bit_depth_readout: string626
    - distance: string627
    - frame_time: string628
    - acquisition_mode: string633
  - detector09
    - positioners
      - name: ['item661']
      - value: ['item662']
      - @NX_class: NXpositioner
    - rois
      - value: [(664, 665)]
      - @NX_class: NXcollection
      - name: string663
    - @NX_class: NXdetector
    - name: string634
    - type: string635
    - manufacturer: string636
    - model: string637
    - preset_time: 638.1
    - live_time: 639.1
    - elapsed_time: 640.1
    - calibration: string641
    - description: string642
    - local_name: string643
    - x_pixel_size: string644
    - y_pixel_size: string645
    - calibration_date: string646
    - layout: string647
    - beam_center_x: string648
    - beam_center_y: string649
    - flatfield_applied: string650
    - pixel_mask: string651
    - pixel_mask_applied: string652
    - countrate_correction_applied: string653
    - saturation_value: string654
    - threshold_energy: string655
    - sensor_thickness: string656
    - sensor_material: string657
    - bit_depth_readout: string658
    - distance: string659
    - frame_time: string660
    - acquisition_mode: string665
  - detector10
    - positioners
      - name: ['item693']
      - value: ['item694']
      - @NX_class: NXpositioner
    - rois
      - value: [(696, 697)]
      - @NX_class: NXcollection
      - name: string695
    - @NX_class: NXdetector
    - name: string666
    - type: string667
    - manufacturer: string668
    - model: string669
    - preset_time: 670.1
    - live_time: 671.1
    - elapsed_time: 672.1
    - calibration: string673
    - description: string674
    - local_name: string675
    - x_pixel_size: string676
    - y_pixel_size: string677
    - calibration_date: string678
    - layout: string679
    - beam_center_x: string680
    - beam_center_y: string681
    - flatfield_applied: string682
    - pixel_mask: string683
    - pixel_mask_applied: string684
    - countrate_correction_applied: string685
    - saturation_value: string686
    - threshold_energy: string687
    - sensor_thickness: string688
    - sensor_material: string689
    - bit_depth_readout: string690
    - distance: string691
    - frame_time: string692
    - acquisition_mode: string697
  - @NX_class: NXinstrument
  - name: string116
- notes
  - @NX_class: NXnote
  - note_00: string698
  - note_01: string699
  - note_02: string700
  - note_03: string701
  - note_04: string702
  - note_05: string703
  - note_06: string704
  - note_07: string705
  - note_08: string706
  - note_09: string707
- process
  - @NX_class: NXprocess
  - program: string708
  - sequence_index: string709
  - version: string710
  - note: string711
  - triggering: string712
- workflow
  - @NX_class: NXprocess
  - name: string713
  - id: string714
  - type: string715
  - status: string716
  - note: string717
- external_references
  - publication
    - @NX_class: NXcite
    - doi: string719
    - endnote: string720
  - datacollector
    - endnote: ['item721']
    - @NX_class: NXcite
  - @NX_class: NXnote
  - neuroglancer: string718
- BCDI
  - beamSizeVertical@units: µm
  - beamSizeHorizontal@units: µm
  - beamSizeVertical: 722.1
  - beamSizeHorizontal: 723.1
  - @NX_class: NXsubentry
- EM
  - voltage@units: kV
  - position_x@units: mm
  - position_y@units: mm
  - dose_per_frame@units: 1/Å²
  - spherical_aberration@units: mm
  - amplitude_contrast@units: %
  - sampling_rate@units: Å
  - tilt_angle@units: deg
  - exposure_time@units: s
  - total_dose@units: 1/Å²
  - energy_filter_slit_width@units: mm
  - dose@units: 1/Å²
  - objective_aperture@units: µm
  - motion_correction
    - total_motion@units: pixel
    - average_motion@units: pixel
    - max_motion@units: pixel
    - frame_dose@units: 1/Å²
    - total_dose@units: 1/Å²
    - total_motion: 749.1
    - average_motion: 750.1
    - max_motion: 751.1
    - frame_dose: 752.1
    - total_dose: 754.1
    - @NX_class: NXcollection
    - total_mrc_number: 748
    - frame_range: string753
  - ctf
    - resolution_limit@units: Å
    - defocus_u@units: Å
    - defocus_v@units: Å
    - avg_defocus@units: Å
    - defocus_range@units: Å
    - sample_tilt_azimuth@units: deg
    - ctf_fit_limit@units: Å
    - angle@units: deg
    - resolution_limit: 756.1
    - defocus_u: 758.1
    - defocus_v: 759.1
    - avg_defocus: 760.1
    - defocus_range: 761.1
    - sample_tilt_azimuth: 762.1
    - ctf_fit_limit: 764.1
    - angle: 765.1
    - @NX_class: NXcollection
    - total_ctf_number: 755
    - correlation: 757.1
    - estimated_b_factor: string763
  - voltage: 725.1
  - position_x: 728.1
  - position_y: 729.1
  - dose_per_frame: 731.1
  - spherical_aberration: 732.1
  - amplitude_contrast: 733.1
  - sampling_rate: 734.1
  - tilt_angle: 735.1
  - exposure_time: 742.1
  - total_dose: 743.1
  - energy_filter_slit_width: 745.1
  - dose: 746.1
  - objective_aperture: 747.1
  - @NX_class: NXsubentry
  - protein_acronym: string724
  - magnification: 726
  - images_count: 727
  - dose_initial: string730
  - grid_name: string736
  - grid_square_name: string737
  - total_movie_number: 738
  - microscope_model: string739
  - camera_model: string740
  - energy_filter_model: string741
  - energy_filter_on: False
- FLUO
  - pixelSize@units: µm
  - dwellTime@units: s
  - scanRange_1@units: µm
  - scanRange_2@units: µm
  - measurement
    - current_start@units: mA
    - current_end@units: mA
    - i0_start@units: photons/s
    - it_start@units: photons/s
    - i0_end@units: photons/s
    - it_end@units: photons/s
    - current_start: 776.1
    - current_end: 777.1
    - i0_start: 778.1
    - it_start: 779.1
    - i0_end: 780.1
    - it_end: 781.1
    - @NX_class: NXcollection
  - pixelSize: [766.1]
  - dwellTime: 767.1
  - scanRange_1: 770.1
  - scanRange_2: 771.1
  - @NX_class: NXsubentry
  - scanDim_1: 768.1
  - scanDim_2: 769.1
  - scanAxis_1: string772
  - scanAxis_2: string773
  - i0: 774.1
  - it: 775.1
- HOLO
  - pixel_size@units: nm
  - sample_detector_distances@units: mm
  - source_sample_distances@units: mm
  - pixel_size: 783.1
  - sample_detector_distances: 784.1
  - source_sample_distances: 785.1
  - @NX_class: NXsubentry
  - n: 782
  - im01NumEnd: 786.1
  - im01NumStart: 787.1
  - im02NumEnd: 788.1
  - im02NumStart: 789.1
  - im03NumEnd: 790.1
  - im03NumStart: 791.1
  - im04NumEnd: 792.1
  - im04NumStart: 793.1
  - ref01NumEnd: 794.1
  - ref02NumEnd: 795.1
  - ref02NumStart: 796.1
  - ref03NumEnd: 797.1
  - ref03NumStart: 798.1
  - ref04NumEnd: 799.1
  - ref04NumStart: 800.1
  - darkNumStart: 801.1
  - darkNumEnd: 802.1
- HTXRPD
  - energy@units: keV
  - exposureTime@units: s
  - distance@units: mm
  - energy: 803.1
  - exposureTime: 804.1
  - distance: 805.1
  - @NX_class: NXsubentry
  - sampleVibration: 806.1
- MRT
  - doseRate@units: Gy/mA/s
  - ctcSpacing@units: µm
  - crossAngle@units: deg
  - intlcdOff@units: µm
  - expoStart@units: mm
  - expoStop@units: mm
  - expoSpeed@units: mm/s
  - dose@units: Gy
  - beamHeight@units: µm
  - beamSize@units: µm
  - doseRate: 808.1
  - ctcSpacing: 810.1
  - crossAngle: 813.1
  - intlcdOff: 816.1
  - expoStart: 817.1
  - expoStop: 818.1
  - expoSpeed: 819.1
  - dose: 826.1
  - beamHeight: 827.1
  - beamSize: 828.1
  - @NX_class: NXsubentry
  - mscType: string807
  - ctcMot: string809
  - ctcN: 811
  - crossMot: string812
  - crossN: 814
  - intlcdMot: string815
  - IC01: 820.1
  - IC02: 821.1
  - IC0MU1: 822.1
  - IC0MU2: 823.1
  - IONCH1: 824.1
  - IONCH2: 825.1
- MX
  - beamSizeAtSampleX@units: mm
  - beamSizeAtSampleY@units: mm
  - detectorDistance@units: mm
  - exposureTime@units: s
  - flux@units: photons/s
  - fluxEnd@units: photons/s
  - motorsValue@units: mm
  - oscillationOverlap@units: deg
  - oscillationRange@units: deg
  - oscillationStart@units: deg
  - resolution@units: Å
  - resolution_at_corner@units: Å
  - wavelength@units: Å
  - xBeam@units: pixel
  - yBeam@units: pixel
  - SAD
    - min_resolution@units: Å
    - max_resolution@units: Å
    - min_resolution: 859.1
    - max_resolution: 860.1
    - @NX_class: NXcollection
    - enantiomorph: string861
    - space_group: string862
    - step: string863
    - solvent: string864
    - pseudo_free_cc: string865
    - cc_partial_model: string866
    - chain_count: string867
    - residues_count: string868
    - average_fragment_length: string869
    - PDB_file: string870
    - MTZ_file: string871
  - MR
    - Phasing
      - @NX_class: NXcollection
      - source: string876
      - search_model: string877
      - space_group: string878
      - number_of_search_models_found: string879
      - best_RFZ: string880
      - best_TFZ: string881
      - LLG: string882
      - monomer_form_count: string883
      - RFZ_list: string884
      - TFZ_list: string885
      - PDB_file: string886
      - MTZ_file: string887
      - MAP_2FOFC: string888
      - MAP_FOFC: string889
    - Refinement
      - @NX_class: NXcollection
      - R_free: string890
      - R_cryst: string891
      - PDB_file: string892
      - MTZ_file: string893
      - MAP_FOFC: string894
      - MAP_2FOFC: string895
    - LigandFitting
      - B_factor@units: Å²
      - ligand_XYZ@units: Å
      - B_factor: 899.1
      - ligand_XYZ: [906.1]
      - @NX_class: NXcollection
      - ligand_FOFC_CC: 896.1
      - R_free: 897.1
      - R_cryst: 898.1
      - occupancy: 900.1
      - PDB_file: string901
      - MTZ_file: string902
      - PNG_2FOFC: string903
      - PNG_FOFC: string904
      - GIF_file: string905
      - ligand_name: string907
      - MAP_FOFC: string908
      - MAP_2FOFC: string909
    - @NX_class: NXcollection
    - step: string872
    - space_group: string873
    - min_resolution: string874
    - max_resolution: string875
  - AutoprocIntegration
    - Scaling
      - @NX_class: NXcollection
      - overall_resolution_limit_low: string938
      - overall_resolution_limit_high: string939
      - overall_r_merge: string940
      - overall_r_meas_within_IPlus_IMinus: string941
      - overall_r_meas_all_IPlus_IMinus: string942
      - overall_r_pim_within_IPlus_IMinus: string943
      - overall_r_pim_all_IPlus_IMinus: string944
      - overall_fractional_partial_bias: string945
      - overall_n_total_observations: string946
      - overall_n_total_unique_observations: string947
      - overall_mean_I_over_sigI: string948
      - overall_completeness: string949
      - overall_multiplicity: string950
      - overall_anomalous_completeness: string951
      - overall_anomalous_multiplicity: string952
      - overall_anomalous: string953
      - overall_cc_half: string954
      - overall_ccAno: string955
      - overall_sigAno: string956
      - overall_isa: string957
      - overall_completeness_spherical: string958
      - overall_completeness_ellipsoidal: string959
      - overall_anomalous_completeness_spherical: string960
      - overall_anomalous_completeness_ellipsoidal: string961
      - inner_resolution_limit_low: string962
      - inner_resolution_limit_high: string963
      - inner_r_merge: string964
      - inner_r_meas_within_IPlus_IMinus: string965
      - inner_r_meas_all_IPlus_IMinus: string966
      - inner_r_pim_within_IPlus_IMinus: string967
      - inner_r_pim_all_IPlus_IMinus: string968
      - inner_fractional_partial_bias: string969
      - inner_n_total_observations: string970
      - inner_n_total_unique_observations: string971
      - inner_mean_I_over_sigI: string972
      - inner_completeness: string973
      - inner_multiplicity: string974
      - inner_anomalous_completeness: string975
      - inner_anomalous_multiplicity: string976
      - inner_anomalous: string977
      - inner_cc_half: string978
      - inner_ccAno: string979
      - inner_sigAno: string980
      - inner_isa: string981
      - inner_completeness_spherical: string982
      - inner_completeness_ellipsoidal: string983
      - inner_anomalous_completeness_spherical: string984
      - inner_anomalous_completeness_ellipsoidal: string985
      - outer_resolution_limit_low: string986
      - outer_resolution_limit_high: string987
      - outer_r_merge: string988
      - outer_r_meas_within_IPlus_IMinus: string989
      - outer_r_meas_all_IPlus_IMinus: string990
      - outer_r_pim_within_IPlus_IMinus: string991
      - outer_r_pim_all_IPlus_IMinus: string992
      - outer_fractional_partial_bias: string993
      - outer_n_total_observations: string994
      - outer_n_total_unique_observations: string995
      - outer_mean_I_over_sigI: string996
      - outer_completeness: string997
      - outer_multiplicity: string998
      - outer_anomalous_completeness: string999
      - outer_anomalous_multiplicity: string1000
      - outer_anomalous: string1001
      - outer_cc_half: string1002
      - outer_ccAno: string1003
      - outer_sigAno: string1004
      - outer_isa: string1005
      - outer_completeness_spherical: string1006
      - outer_completeness_ellipsoidal: string1007
      - outer_anomalous_completeness_spherical: string1008
      - outer_anomalous_completeness_ellipsoidal: string1009
    - @NX_class: NXcollection
    - start_image_number: 910
    - end_image_number: 911
    - detector_distance: string912
    - beam_x: string913
    - beam_y: string914
    - rotation_axis_x: string915
    - rotation_axis_y: string916
    - rotation_axis_z: string917
    - beam_vector_x: string918
    - beam_vector_y: string919
    - beam_vector_z: string920
    - space_group: string921
    - cell_a: string922
    - cell_b: string923
    - cell_c: string924
    - cell_alpha: string925
    - cell_beta: string926
    - cell_gamma: string927
    - anomalous: string928
    - diffraction_limit_direction_1: string929
    - diffraction_limit_direction_2: string930
    - diffraction_limit_direction_3: string931
    - principal_axis_1: string932
    - principal_axis_2: string933
    - principal_axis_3: string934
    - fit_to_line_slope: string935
    - fit_to_line_r2: string936
    - fit_to_line_stdv: string937
  - phix@units: mm
  - phiy@units: mm
  - phiz@units: mm
  - sampx@units: mm
  - sampy@units: mm
  - kappa@units: deg
  - phi@units: deg
  - omega@units: deg
  - beamSizeAtSampleX: 832.1
  - beamSizeAtSampleY: 833.1
  - detectorDistance: 835.1
  - exposureTime: 837.1
  - flux: 838.1
  - fluxEnd: 839.1
  - motorsValue: 841.1
  - oscillationOverlap: 843.1
  - oscillationRange: 844.1
  - oscillationStart: 845.1
  - resolution: 846.1
  - resolution_at_corner: 847.1
  - wavelength: 852.1
  - xBeam: 853.1
  - yBeam: 854.1
  - phix: 1012.1
  - phiy: 1013.1
  - phiz: 1014.1
  - sampx: 1015.1
  - sampy: 1016.1
  - kappa: 1017.1
  - phi: 1018.1
  - omega: 1019.1
  - @NX_class: NXsubentry
  - aperture: string829
  - kappa_settings_id: string830
  - beamShape: string831
  - dataCollectionId: string834
  - directory: string836
  - motorsName: string840
  - numberOfImages: 842
  - scanType: string848
  - startImageNumber: 849
  - template: string850
  - transmission: string851
  - rotation_axis: string855
  - axis_range: string856
  - axis_start: string857
  - axis_end: string858
  - position_id: string1010
  - characterisation_id: string1011
  - positionName: string1020
- PTYCHO
  - beamSize@units: µm
  - stepSize@units: µm
  - focusToDetectorDistance@units: mm
  - countTime@units: s
  - pixelSize@units: µm
  - Axis1
    - range@units: µm
    - range: 1032.1
    - @NX_class: NXcollection
    - name: string1031
  - Axis2
    - range@units: µm
    - range: 1034.1
    - @NX_class: NXcollection
    - name: string1033
  - beamSize: 1022.1
  - stepSize: 1023.1
  - focusToDetectorDistance: 1024.1
  - countTime: 1025.1
  - pixelSize: 1030.1
  - @NX_class: NXsubentry
  - propagation: string1021
  - parameters: string1026
  - tomoParameters: string1027
  - refN: 1028.1
  - darkN: 1029.1
- SAXS
  - vc@units: nm³
  - vc_error@units: nm³
  - mass@units: kDa
  - mass_error@units: kDa
  - vc: 1079.1
  - vc_error: 1080.1
  - mass: 1081.1
  - mass_error: 1082.1
  - @NX_class: NXsubentry
  - definition: string1035
  - version: string1036
  - directory: string1037
  - experimentType: string1038
  - prefix: string1039
  - maskFile: string1040
  - numberFrames: string1041
  - timePerFrame: string1042
  - concentration: string1043
  - comments: string1044
  - code: string1045
  - detector_distance: string1046
  - waveLength: string1047
  - pixelSizeX: string1048
  - pixelSizeY: string1049
  - beam_center_x: string1050
  - beam_center_y: string1051
  - normalisation: string1052
  - diode_currents: string1053
  - acronym: string1054
  - transmission: string1055
  - storage_temperature: string1056
  - exposure_temperature: string1057
  - column_type: string1058
  - flow_rate: string1059
  - hplc_port: string1060
  - sample_type: string1061
  - run_number: string1062
  - experiment_type: string1063
  - guinier_rg: string1064
  - guinier_sigma_rg: string1065
  - guinier_points: string1066
  - guinier_points_start: string1067
  - guinier_points_end: string1068
  - guinier_i0: string1069
  - rg: string1070
  - rg_std: string1071
  - rg_avg: string1072
  - total: string1073
  - d_max: string1074
  - d_max_std: string1075
  - porod_volume: string1076
  - porod_MM_volume_estimation: string1077
  - frames_averaged: string1078
  - chi2r: string1083
  - chi2r_error: string1084
- SCXRD
  - sample_detector_distance@units: m
  - wavelength@units: Å
  - detector_tilts@units: deg
  - rotation_range@units: deg
  - rotation_step@units: deg
  - exposure_time@units: s
  - sample_detector_distance: 1085.1
  - wavelength: 1088.1
  - detector_tilts: 1089.1
  - rotation_range: 1091.1
  - rotation_step: 1092.1
  - exposure_time: 1093.1
  - @NX_class: NXsubentry
  - beam_center_x: 1086.1
  - beam_center_y: 1087.1
  - rotation_axis: string1090
- SSX
  - jet
    - @NX_class: NXcollection
    - speed: string1094
    - size: string1095
  - chip
    - @NX_class: NXcollection
    - horizontal_spacing: string1096
    - vertical_spacing: string1097
    - row_number: string1098
    - column_number: string1099
    - model: string1100
  - @NX_class: NXsubentry
- SXDM
  - beamSizeVertical@units: µm
  - beamSizeHorizontal@units: µm
  - beamSizeVertical: 1101.1
  - beamSizeHorizontal: 1102.1
  - @NX_class: NXsubentry
- TOMO
  - acquisition
    - y_step@units: mm
    - z_step@units: mm
    - start_angle@units: deg
    - exposure_time@units: s
    - sample_detector_distance@units: mm
    - source_sample_distance@units: mm
    - energy@units: keV
    - camera_pixel_size@units: µm
    - sample_pixel_size@units: µm
    - optic_magnified_pixel_size@units: µm
    - srcur_start@units: mA
    - srcur_stop@units: mA
    - scan_range@units: deg
    - acc_exposure_time@units: s
    - accel_disp@units: mm
    - latency_time@units: s
    - duration@units: s
    - zseries
      - z_start@units: mm
      - z_delta@units: mm
      - duration@units: s
      - z_start: 1144.1
      - z_delta: 1145.1
      - duration: 1147.1
      - @NX_class: NXcollection
      - z_mot: string1143
      - z_n_steps: 1146.1
    - random_motion_range@units: pixel
    - rotation_flat_position@units: deg
    - y_step: 1108.1
    - z_step: 1109.1
    - start_angle: 1110.1
    - exposure_time: 1111.1
    - sample_detector_distance: 1112.1
    - source_sample_distance: 1113.1
    - energy: 1114.1
    - camera_pixel_size: 1117.1
    - sample_pixel_size: 1118.1
    - optic_magnified_pixel_size: 1119.1
    - srcur_start: 1123.1
    - srcur_stop: 1124.1
    - scan_range: 1125.1
    - acc_exposure_time: 1127.1
    - accel_disp: 1129.1
    - latency_time: 1135.1
    - duration: 1141.1
    - random_motion_range: 1148.1
    - rotation_flat_position: 1150.1
    - @NX_class: NXcollection
    - technique: string1103
    - proj_n: 1104.1
    - flat_n: 1105.1
    - dark_n: 1106.1
    - flat_on: 1107.1
    - half_acquisition: True
    - type: string1116
    - magnification: 1120.1
    - beam_magnification: 1121.1
    - read_srcur: False
    - scan_type: string1126
    - acc_frames_count: 1128.1
    - beam_check: False
    - camera_x_mot: string1131
    - camera_acq_mode: string1132
    - camera_flip_horz: True
    - camera_flip_vert: False
    - no_images_at_end: False
    - no_flat_at_end: True
    - optic_name: string1138
    - optic_type: string1139
    - scintillator: string1140
    - comment: string1142
    - n_subtomo: 1149
  - reconstruction
    - angle_offset@units: deg
    - voxel_size_x@units: µm
    - voxel_size_y@units: µm
    - voxel_size_z@units: µm
    - phase
      - detector_sample_distance@units: mm
      - detector_sample_distance: 1182.1
      - @NX_class: NXcollection
      - ctf_advanced_params: string1179
      - ctf_geometry: string1180
      - delta_beta: 1181.1
      - method: string1183
      - padding_type: string1184
      - unsharp_coeff: 1185.1
      - unsharp_method: string1186
      - unsharp_sigma: 1187.1
    - angle_offset: 1151.1
    - voxel_size_x: 1173.1
    - voxel_size_y: 1174.1
    - voxel_size_z: 1175.1
    - @NX_class: NXcollection
    - angles_file: string1152
    - axis_correction_file: string1153
    - centered_axis: False
    - clip_outer_circle: True
    - cor_options: string1156
    - enable_halftomo: True
    - end_x: 1158
    - end_y: 1159
    - end_z: 1160
    - fbp_filter_cutoff: 1161.1
    - fbp_filter_type: string1162
    - method: string1163
    - optim_algorithm: string1164
    - padding_type: string1165
    - preconditioning_filter: string1166
    - rotation_axis_position: 1167.1
    - start_x: 1168
    - start_y: 1169
    - start_z: 1170
    - translation_movements_file: string1171
    - weight_tv: 1172.1
    - nb_voxel_x: 1176.1
    - nb_voxel_y: 1177.1
    - nb_voxel_z: 1178.1
  - xshutter_time@units: ms
  - readout_time@units: s
  - safe_time@units: s
  - sx0@units: mm
  - camera_time@units: s
  - surface_dose@units: Gy/s
  - voi_dose@units: Gy/s
  - total_voi_dose@units: kGy
  - propagationDistance@units: mm
  - xshutter_time: 1190.1
  - readout_time: 1202.1
  - safe_time: 1205.1
  - sx0: 1212.1
  - camera_time: 1213.1
  - surface_dose: 1220.1
  - voi_dose: 1221.1
  - total_voi_dose: 1222.1
  - propagationDistance: 1227.1
  - @NX_class: NXsubentry
  - experiment_type: string1188
  - ftomo_par: string1189
  - images_per_step: 1191.1
  - interlaced: 1192.1
  - nested: 1193.1
  - save_separate_dark_image: 1194.1
  - auto_update_ref: 1195.1
  - images_at_end_as_quali: 1196.1
  - live_correction: 1197.1
  - mono_tune_on_ref: 1198.1
  - no_accel_corr: 1199.1
  - open_slits_on_quali: 1200.1
  - optics_eye_piece: 1201.1
  - flat_power: 1203.1
  - rounding_correction: 1204.1
  - shift_turns: 1206.1
  - speed_corr_factor: 1207.1
  - mono_tune_on_start: 1208.1
  - soft_version: string1209
  - vacuum_value: 1210.1
  - vacuum_name: string1211
  - i0: 1214.1
  - it: 1215.1
  - interlaced_roundtrip: 1216.1
  - scanning_mode: string1217
  - x_pixel_n: 1218.1
  - y_pixel_n: 1219.1
  - reference_description: string1223
  - subframe_nb: 1224.1
  - idNames: string1225
  - scanRadix: string1226
  - xStages: 1228.1
  - yStages: 1229.1
  - zStages: 1230.1
  - min32to16bits: 1231.1
  - max32to16bits: 1232.1
  - jp2CompressRatio: 1233.1
- WAXS
  - @NX_class: NXsubentry
  - definition: string1234
- input_datasets: ['item6']
- definition: ['XRAYS']
- technique_pid: ['https://w3id.org/PaN/ESRFET#XRAYS']
- doi_users: [['item14']]
- doi_rights: ['item15']
- doi_keywords: ['item17']
- doi_refrence_urls: ['item18']
- group_by: ['item22']
- @NX_class: NXentry
- title: string0
- scanNumber: string1
- scan_description: string2
- proposal: string3
- dataset_type: string4
- folder_path: string5
- start_time: 2023-11-14T22:13:27
- end_time: 2023-11-14T22:13:28
- technique_pid_esrfet_version: 0.1.0
- doi_abstract: string12xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
- doi_title: string13xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
- doi_citation_publication_doi: 10.1000/16abc
- project_name: string19
- machine: string20
- software: string21
- complete: True
- investigationId: 24